Calculated structure of the nickel-reconstituted heme pentapeptide model.

 

 

The major conclusion is that heme pentapeptide interacts with and induces the nonplanarity of the porphyrin, but only when the polypeptide itself is in a hydrophobic environment--either the interior of a micelle or within the rest of the cytochrome c protein.  This provides a means by which protein-protein binding can influence the structure of the heme and its functional properties such as redox potential.   In addition, the Fe(III)/Fe(II) reduction can influence the conformation of the pentapeptide and influence the interaction with a protein bound at the surface of cytochrome c near the pentapeptide. 

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